Program
(All times are US Eastern time) |
Recordings |
March 5 |
Strategies for assigning cell identity in single-cell datasets
Organizers: Fiona McCarthy/Ben Cole |
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11:00-11:05 |
Session objective, Introduction of speakers, Instructions to participants. Ben Cole Lawrence Berkeley National Laboratory and Fiona McCarthy University of Arizona. |
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11:05-11:30 |
"Orthologous marker groups reveal broad cell identity conservation across plant single-cell transcriptomes." Song Li, Virginia Polytechnic Institute and State University, USA |
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11:30-11:55 |
"CellTypist and CellHint: towards automated annotation and integration of single-cell data." Chaun Xu, Cambridge Stem Cell Institute, Cambridge, UK |
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11:55-12:05 |
Q&A for the speakers |
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12:05-12:30 |
Community discussion about assigning cell identity in single-cell data. |
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March 12 |
The use of single cell data for advancing Genome 2 Phenome.
Organizers: Chris Tuggle, Wes Warren |
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11:00-11:05 |
Session objective, Introduction of speakers, Instructions to participants. Wes Warren, University of Missouri. |
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11:05-11:30 |
"Cell type Expression phenotyping from deconvolution of bulk RNAseq data." Chris Tuggle Iowa State University, Ames, USA. |
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11:30-11:55 |
"The sc-eQTLGen consortium framework: a federated pipeline for genotype- and phenotype-based association analyses." Monique van der Wijst, Groningen University Medical Center, Groningen, The Netherlands. |
|
11:55-12:05 |
Q&A for the speakers. |
|
12:05-12:30 |
Community discussion about assigning cell identity in single-cell data |
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Activities are funded by USDA-AG2PI Award Number 2024-70412-43649
"Empowering G2P in Agriculture: Building a Collaborative Environment
for Single-Cell Applications".